Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upb1Q8VC97 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Phf7-203ENSMUST00000226565 1971 ntBASIC18.36■□□□□ 0.53
Upb1Q8VC97 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Upb1Q8VC97 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.35■□□□□ 0.53
Upb1Q8VC97 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.35■□□□□ 0.53
Upb1Q8VC97 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.35■□□□□ 0.53
Upb1Q8VC97 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Mir770-201ENSMUST00000103252 94 ntBASIC18.35■□□□□ 0.53
Upb1Q8VC97 Gm6623-201ENSMUST00000173570 544 ntBASIC18.35■□□□□ 0.53
Upb1Q8VC97 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upb1Q8VC97 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Gm7284-201ENSMUST00000131667 944 ntBASIC18.34■□□□□ 0.53
Upb1Q8VC97 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.34■□□□□ 0.53
Upb1Q8VC97 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Upb1Q8VC97 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.34■□□□□ 0.53
Upb1Q8VC97 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upb1Q8VC97 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Upb1Q8VC97 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upb1Q8VC97 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upb1Q8VC97 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upb1Q8VC97 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upb1Q8VC97 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upb1Q8VC97 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upb1Q8VC97 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upb1Q8VC97 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upb1Q8VC97 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upb1Q8VC97 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upb1Q8VC97 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upb1Q8VC97 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upb1Q8VC97 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upb1Q8VC97 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upb1Q8VC97 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.32■□□□□ 0.52
Upb1Q8VC97 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms