Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Phf7-203ENSMUST00000226565 1971 ntBASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rpp40Q8R1F9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Gm11355-201ENSMUST00000121120 306 ntBASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rpp40Q8R1F9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Gm6345-202ENSMUST00000180900 204 ntBASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rpp40Q8R1F9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Gm37722-201ENSMUST00000193757 208 ntBASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rpp40Q8R1F9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpp40Q8R1F9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpp40Q8R1F9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rpp40Q8R1F9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rpp40Q8R1F9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rpp40Q8R1F9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.08■□□□□ 0.49
Rpp40Q8R1F9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms