Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Gm4968-201ENSMUST00000071458 858 ntBASIC10.64□□□□□ -0.71
Cystm1Q8K353 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cystm1Q8K353 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC10.63□□□□□ -0.71
Cystm1Q8K353 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC10.63□□□□□ -0.71
Cystm1Q8K353 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC10.63□□□□□ -0.71
Cystm1Q8K353 AC112142.1-201ENSMUST00000228796 918 ntBASIC10.63□□□□□ -0.71
Cystm1Q8K353 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cystm1Q8K353 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Gm37736-201ENSMUST00000193564 2802 ntBASIC10.62□□□□□ -0.71
Cystm1Q8K353 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Gm6365-201ENSMUST00000054711 744 ntBASIC10.62□□□□□ -0.71
Cystm1Q8K353 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Cystm1Q8K353 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cystm1Q8K353 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cystm1Q8K353 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cystm1Q8K353 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.61□□□□□ -0.71
Cystm1Q8K353 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cystm1Q8K353 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cystm1Q8K353 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Cystm1Q8K353 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cystm1Q8K353 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cystm1Q8K353 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Cystm1Q8K353 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Cystm1Q8K353 Gm9194-201ENSMUST00000220749 1447 ntBASIC10.61□□□□□ -0.71
Cystm1Q8K353 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms