Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim68Q8K243 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim68Q8K243 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim68Q8K243 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.32■□□□□ 0.52
Trim68Q8K243 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim68Q8K243 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Trim68Q8K243 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim68Q8K243 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim68Q8K243 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim68Q8K243 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim68Q8K243 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Gm11355-201ENSMUST00000121120 306 ntBASIC18.32■□□□□ 0.52
Trim68Q8K243 Gm11950-201ENSMUST00000121615 838 ntBASIC18.32■□□□□ 0.52
Trim68Q8K243 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.32■□□□□ 0.52
Trim68Q8K243 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim68Q8K243 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim68Q8K243 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim68Q8K243 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Trim68Q8K243 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim68Q8K243 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim68Q8K243 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim68Q8K243 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim68Q8K243 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim68Q8K243 Gm18958-201ENSMUST00000174258 762 ntBASIC18.31■□□□□ 0.52
Trim68Q8K243 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Trim68Q8K243 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim68Q8K243 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.31■□□□□ 0.52
Trim68Q8K243 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim68Q8K243 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim68Q8K243 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim68Q8K243 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim68Q8K243 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim68Q8K243 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trim68Q8K243 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim68Q8K243 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trim68Q8K243 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trim68Q8K243 Gm13401-201ENSMUST00000117074 291 ntBASIC18.3■□□□□ 0.52
Trim68Q8K243 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trim68Q8K243 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim68Q8K243 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim68Q8K243 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trim68Q8K243 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim68Q8K243 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Trim68Q8K243 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.29■□□□□ 0.52
Trim68Q8K243 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Gm5867-201ENSMUST00000063197 592 ntBASIC18.29■□□□□ 0.52
Trim68Q8K243 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Trim68Q8K243 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim68Q8K243 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim68Q8K243 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim68Q8K243 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim68Q8K243 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.28■□□□□ 0.52
Trim68Q8K243 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim68Q8K243 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim68Q8K243 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms