Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Gm11336-201ENSMUST00000118168 334 ntBASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rdh1Q8CGV4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Ank2-226ENSMUST00000189368 339 ntBASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rdh1Q8CGV4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rdh1Q8CGV4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rdh1Q8CGV4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms