Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa4Q8CA71 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa4Q8CA71 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa4Q8CA71 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shisa4Q8CA71 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shisa4Q8CA71 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Shisa4Q8CA71 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Shisa4Q8CA71 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shisa4Q8CA71 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Gm27389-201ENSMUST00000183622 195 ntBASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Shisa4Q8CA71 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Gm11336-201ENSMUST00000118168 334 ntBASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Shisa4Q8CA71 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa4Q8CA71 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Gm18115-201ENSMUST00000221209 621 ntBASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Shisa4Q8CA71 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Gm14859-201ENSMUST00000117752 357 ntBASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.61■□□□□ 0.73
Shisa4Q8CA71 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Shisa4Q8CA71 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms