Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc46a2Q8CA03 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Gm15375-201ENSMUST00000119510 849 ntBASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.26■□□□□ 0.19
Slc46a2Q8CA03 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Gm12933-201ENSMUST00000120203 872 ntBASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Gm27011-201ENSMUST00000182352 972 ntBASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Slc46a2Q8CA03 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Slc46a2Q8CA03 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms