Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rtp1Q8C8C1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Rprl3-201ENSMUST00000157400 290 ntBASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtp1Q8C8C1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Gm23935-201ENSMUST00000102303 57 ntBASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Gm24270-201ENSMUST00000102326 57 ntBASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Gm24245-201ENSMUST00000157318 57 ntBASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtp1Q8C8C1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rtp1Q8C8C1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtp1Q8C8C1 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.27■□□□□ 0.67
Rtp1Q8C8C1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Mir5126-201ENSMUST00000175513 77 ntBASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtp1Q8C8C1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Gm13186-201ENSMUST00000118031 316 ntBASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Gm13312-201ENSMUST00000119631 718 ntBASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtp1Q8C8C1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtp1Q8C8C1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtp1Q8C8C1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.24■□□□□ 0.67
Rtp1Q8C8C1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.24■□□□□ 0.67
Rtp1Q8C8C1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.24■□□□□ 0.67
Rtp1Q8C8C1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.24■□□□□ 0.67
Rtp1Q8C8C1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtp1Q8C8C1 Phf7-203ENSMUST00000226565 1971 ntBASIC19.24■□□□□ 0.67
Rtp1Q8C8C1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtp1Q8C8C1 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtp1Q8C8C1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 Gm2756-201ENSMUST00000195851 400 ntBASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rtp1Q8C8C1 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms