Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Gm10175-202ENSMUST00000208752 441 ntBASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Ccdc60Q8C4J0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc60Q8C4J0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc60Q8C4J0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc60Q8C4J0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc60Q8C4J0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc60Q8C4J0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc60Q8C4J0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc60Q8C4J0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ccdc60Q8C4J0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc60Q8C4J0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc60Q8C4J0 Gm7213-201ENSMUST00000215977 950 ntBASIC21.56■■□□□ 1.04
Ccdc60Q8C4J0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ccdc60Q8C4J0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Gm10566-201ENSMUST00000086739 996 ntBASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc60Q8C4J0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc60Q8C4J0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc60Q8C4J0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc60Q8C4J0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Ccdc60Q8C4J0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc60Q8C4J0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc60Q8C4J0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21.54■■□□□ 1.04
Ccdc60Q8C4J0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc60Q8C4J0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc60Q8C4J0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc60Q8C4J0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Gm16401-202ENSMUST00000197463 2074 ntBASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc60Q8C4J0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ccdc60Q8C4J0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Actl10-202ENSMUST00000226583 1501 ntBASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ccdc60Q8C4J0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms