Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne1Q8C166 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne1Q8C166 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne1Q8C166 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne1Q8C166 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne1Q8C166 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne1Q8C166 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cpne1Q8C166 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne1Q8C166 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne1Q8C166 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cpne1Q8C166 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.83■□□□□ 0.12
Cpne1Q8C166 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Il3ra-202ENSMUST00000223589 738 ntBASIC15.82■□□□□ 0.12
Cpne1Q8C166 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Cpne1Q8C166 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.81■□□□□ 0.12
Cpne1Q8C166 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cpne1Q8C166 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Gm43799-201ENSMUST00000201845 579 ntBASIC15.8■□□□□ 0.12
Cpne1Q8C166 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cpne1Q8C166 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.79■□□□□ 0.12
Cpne1Q8C166 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.79■□□□□ 0.12
Cpne1Q8C166 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Gm13559-201ENSMUST00000120476 863 ntBASIC15.79■□□□□ 0.12
Cpne1Q8C166 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.79■□□□□ 0.12
Cpne1Q8C166 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.79■□□□□ 0.12
Cpne1Q8C166 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cpne1Q8C166 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms