Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.39■□□□□ 0.37
Suds3Q8BR65 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Suds3Q8BR65 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.38■□□□□ 0.37
Suds3Q8BR65 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.38■□□□□ 0.37
Suds3Q8BR65 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.38■□□□□ 0.37
Suds3Q8BR65 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Suds3Q8BR65 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Suds3Q8BR65 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.37■□□□□ 0.37
Suds3Q8BR65 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.37■□□□□ 0.37
Suds3Q8BR65 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Suds3Q8BR65 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Suds3Q8BR65 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.36■□□□□ 0.37
Suds3Q8BR65 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Mir5122-201ENSMUST00000175004 89 ntBASIC17.36■□□□□ 0.37
Suds3Q8BR65 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Suds3Q8BR65 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.36■□□□□ 0.37
Suds3Q8BR65 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Suds3Q8BR65 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.35■□□□□ 0.37
Suds3Q8BR65 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.35■□□□□ 0.37
Suds3Q8BR65 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Suds3Q8BR65 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Suds3Q8BR65 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms