Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14□□□□□ -0.17
Smco3Q8BQM7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smco3Q8BQM7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smco3Q8BQM7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Gm13234-201ENSMUST00000120010 747 ntBASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Nespas-201ENSMUST00000143738 1083 ntBASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smco3Q8BQM7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smco3Q8BQM7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smco3Q8BQM7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms