Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Usp8Q80U87 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Usp8Q80U87 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.98■□□□□ 0.31
Usp8Q80U87 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.98■□□□□ 0.31
Usp8Q80U87 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Usp8Q80U87 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Usp8Q80U87 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.97■□□□□ 0.31
Usp8Q80U87 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.97■□□□□ 0.31
Usp8Q80U87 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.97■□□□□ 0.31
Usp8Q80U87 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.97■□□□□ 0.31
Usp8Q80U87 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Usp8Q80U87 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Usp8Q80U87 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Usp8Q80U87 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Usp8Q80U87 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Usp8Q80U87 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.96■□□□□ 0.31
Usp8Q80U87 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.96■□□□□ 0.31
Usp8Q80U87 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp8Q80U87 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.96■□□□□ 0.31
Usp8Q80U87 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Gm42545-201ENSMUST00000202755 922 ntBASIC16.96■□□□□ 0.31
Usp8Q80U87 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.96■□□□□ 0.31
Usp8Q80U87 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.96■□□□□ 0.31
Usp8Q80U87 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.96■□□□□ 0.31
Usp8Q80U87 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Usp8Q80U87 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Usp8Q80U87 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.96■□□□□ 0.3
Usp8Q80U87 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.96■□□□□ 0.3
Usp8Q80U87 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Usp8Q80U87 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Usp8Q80U87 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Usp8Q80U87 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Usp8Q80U87 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 Gm12382-201ENSMUST00000122005 922 ntBASIC16.95■□□□□ 0.3
Usp8Q80U87 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.95■□□□□ 0.3
Usp8Q80U87 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.95■□□□□ 0.3
Usp8Q80U87 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Usp8Q80U87 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Usp8Q80U87 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.94■□□□□ 0.3
Usp8Q80U87 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Usp8Q80U87 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Usp8Q80U87 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Usp8Q80U87 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms