Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Gm10566-201ENSMUST00000086739 996 ntBASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdh19Q80TF3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdh19Q80TF3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Gm27000-201ENSMUST00000182943 842 ntBASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh19Q80TF3 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh19Q80TF3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdh19Q80TF3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh19Q80TF3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh19Q80TF3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh19Q80TF3 Gm7284-201ENSMUST00000131667 944 ntBASIC16.58■□□□□ 0.24
Pcdh19Q80TF3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Pcdh19Q80TF3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh19Q80TF3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh19Q80TF3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh19Q80TF3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh19Q80TF3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh19Q80TF3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Gm29518-201ENSMUST00000190858 372 ntBASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Rarb-207ENSMUST00000225921 2756 ntBASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh19Q80TF3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh19Q80TF3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms