Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rfx4Q7TNK1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rfx4Q7TNK1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rfx4Q7TNK1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Rfx4Q7TNK1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rfx4Q7TNK1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx4Q7TNK1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rfx4Q7TNK1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Rfx4Q7TNK1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rfx4Q7TNK1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Gm44549-201ENSMUST00000208351 577 ntBASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.25■□□□□ 0.19
Rfx4Q7TNK1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Mir6349-201ENSMUST00000184059 97 ntBASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rfx4Q7TNK1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rfx4Q7TNK1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms