Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Casc1Q6TDU8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Casc1Q6TDU8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Gm11643-201ENSMUST00000119578 864 ntBASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Casc1Q6TDU8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.17■□□□□ 0.82
Casc1Q6TDU8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Haglr-201ENSMUST00000100000 2085 ntBASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Casc1Q6TDU8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Casc1Q6TDU8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Casc1Q6TDU8 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.15■□□□□ 0.82
Casc1Q6TDU8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms