Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cachd1Q6PDJ1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cachd1Q6PDJ1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cachd1Q6PDJ1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cachd1Q6PDJ1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Il3ra-202ENSMUST00000223589 738 ntBASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Cachd1Q6PDJ1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cachd1Q6PDJ1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cachd1Q6PDJ1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Gm25911-201ENSMUST00000157621 56 ntBASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Gm24841-201ENSMUST00000158676 357 ntBASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 AA543401-201ENSMUST00000164248 1269 ntBASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Gm9731-201ENSMUST00000209480 747 ntBASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cachd1Q6PDJ1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cachd1Q6PDJ1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cachd1Q6PDJ1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
Cachd1Q6PDJ1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cachd1Q6PDJ1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cachd1Q6PDJ1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cachd1Q6PDJ1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cachd1Q6PDJ1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cachd1Q6PDJ1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cachd1Q6PDJ1 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cachd1Q6PDJ1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cachd1Q6PDJ1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cachd1Q6PDJ1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms