Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col11a2Q64739 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col11a2Q64739 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Col11a2Q64739 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Col11a2Q64739 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col11a2Q64739 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col11a2Q64739 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.51■□□□□ 0.87
Col11a2Q64739 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col11a2Q64739 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col11a2Q64739 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Col11a2Q64739 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col11a2Q64739 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col11a2Q64739 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Col11a2Q64739 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Col11a2Q64739 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.5■□□□□ 0.87
Col11a2Q64739 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col11a2Q64739 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col11a2Q64739 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col11a2Q64739 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.5■□□□□ 0.87
Col11a2Q64739 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Col11a2Q64739 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.5■□□□□ 0.87
Col11a2Q64739 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col11a2Q64739 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col11a2Q64739 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col11a2Q64739 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col11a2Q64739 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col11a2Q64739 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col11a2Q64739 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col11a2Q64739 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col11a2Q64739 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Col11a2Q64739 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Col11a2Q64739 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col11a2Q64739 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col11a2Q64739 Gm6089-201ENSMUST00000197666 938 ntBASIC20.48■□□□□ 0.87
Col11a2Q64739 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.48■□□□□ 0.87
Col11a2Q64739 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col11a2Q64739 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col11a2Q64739 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col11a2Q64739 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col11a2Q64739 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.47■□□□□ 0.87
Col11a2Q64739 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.47■□□□□ 0.87
Col11a2Q64739 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.47■□□□□ 0.87
Col11a2Q64739 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Col11a2Q64739 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.47■□□□□ 0.87
Col11a2Q64739 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col11a2Q64739 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.47■□□□□ 0.87
Col11a2Q64739 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col11a2Q64739 Gm11780-201ENSMUST00000136880 516 ntBASIC20.47■□□□□ 0.87
Col11a2Q64739 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col11a2Q64739 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col11a2Q64739 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Col11a2Q64739 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.46■□□□□ 0.87
Col11a2Q64739 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col11a2Q64739 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col11a2Q64739 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col11a2Q64739 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.46■□□□□ 0.87
Col11a2Q64739 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col11a2Q64739 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col11a2Q64739 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col11a2Q64739 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col11a2Q64739 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col11a2Q64739 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Col11a2Q64739 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Col11a2Q64739 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.45■□□□□ 0.86
Col11a2Q64739 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Col11a2Q64739 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col11a2Q64739 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.44■□□□□ 0.86
Col11a2Q64739 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.44■□□□□ 0.86
Col11a2Q64739 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col11a2Q64739 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col11a2Q64739 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col11a2Q64739 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col11a2Q64739 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Col11a2Q64739 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col11a2Q64739 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col11a2Q64739 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms