Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim27Q62158 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim27Q62158 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim27Q62158 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim27Q62158 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim27Q62158 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim27Q62158 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim27Q62158 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim27Q62158 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim27Q62158 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim27Q62158 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
Trim27Q62158 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim27Q62158 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim27Q62158 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim27Q62158 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim27Q62158 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim27Q62158 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim27Q62158 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim27Q62158 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Trim27Q62158 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim27Q62158 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim27Q62158 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim27Q62158 Gm7889-201ENSMUST00000185591 958 ntBASIC20.74■□□□□ 0.91
Trim27Q62158 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim27Q62158 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim27Q62158 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim27Q62158 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trim27Q62158 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim27Q62158 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim27Q62158 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.73■□□□□ 0.91
Trim27Q62158 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.73■□□□□ 0.91
Trim27Q62158 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.73■□□□□ 0.91
Trim27Q62158 Mir6982-201ENSMUST00000184354 68 ntBASIC20.73■□□□□ 0.91
Trim27Q62158 Gm2274-201ENSMUST00000184539 609 ntBASIC20.73■□□□□ 0.91
Trim27Q62158 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.73■□□□□ 0.91
Trim27Q62158 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Trim27Q62158 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim27Q62158 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim27Q62158 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim27Q62158 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.72■□□□□ 0.91
Trim27Q62158 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.72■□□□□ 0.91
Trim27Q62158 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim27Q62158 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim27Q62158 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim27Q62158 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim27Q62158 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.71■□□□□ 0.91
Trim27Q62158 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim27Q62158 Gm13186-201ENSMUST00000118031 316 ntBASIC20.71■□□□□ 0.91
Trim27Q62158 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.71■□□□□ 0.91
Trim27Q62158 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.71■□□□□ 0.91
Trim27Q62158 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.71■□□□□ 0.91
Trim27Q62158 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.71■□□□□ 0.91
Trim27Q62158 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.71■□□□□ 0.91
Trim27Q62158 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Gm10566-201ENSMUST00000086739 996 ntBASIC20.71■□□□□ 0.91
Trim27Q62158 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.71■□□□□ 0.91
Trim27Q62158 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.71■□□□□ 0.91
Trim27Q62158 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.71■□□□□ 0.91
Trim27Q62158 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim27Q62158 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim27Q62158 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim27Q62158 Gm16061-201ENSMUST00000122167 857 ntBASIC20.7■□□□□ 0.9
Trim27Q62158 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim27Q62158 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms