Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav8d-1Q5R1H8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Gm12441-201ENSMUST00000121806 588 ntBASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav8d-1Q5R1H8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav8d-1Q5R1H8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trav8d-1Q5R1H8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav8d-1Q5R1H8 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Gm26524-201ENSMUST00000192339 390 ntBASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav8d-1Q5R1H8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Gm4968-201ENSMUST00000071458 858 ntBASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav8d-1Q5R1H8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms