Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Mmp25Q3U435 Gm8587-201ENSMUST00000076538 843 ntBASIC15.91■□□□□ 0.14
Mmp25Q3U435 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Mmp25Q3U435 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Mmp25Q3U435 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Mmp25Q3U435 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.91■□□□□ 0.14
Mmp25Q3U435 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Mmp25Q3U435 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.91■□□□□ 0.14
Mmp25Q3U435 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Mmp25Q3U435 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Mmp25Q3U435 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Gm26039-201ENSMUST00000158152 144 ntBASIC15.9■□□□□ 0.14
Mmp25Q3U435 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Mmp25Q3U435 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.89■□□□□ 0.13
Mmp25Q3U435 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Mmp25Q3U435 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.88■□□□□ 0.13
Mmp25Q3U435 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.88■□□□□ 0.13
Mmp25Q3U435 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Gm10566-201ENSMUST00000086739 996 ntBASIC15.88■□□□□ 0.13
Mmp25Q3U435 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Mmp25Q3U435 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.88■□□□□ 0.13
Mmp25Q3U435 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.87■□□□□ 0.13
Mmp25Q3U435 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.87■□□□□ 0.13
Mmp25Q3U435 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Mmp25Q3U435 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.87■□□□□ 0.13
Mmp25Q3U435 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Mmp25Q3U435 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.86■□□□□ 0.13
Mmp25Q3U435 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Mmp25Q3U435 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Mmp25Q3U435 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.86■□□□□ 0.13
Mmp25Q3U435 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Mmp25Q3U435 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Mmp25Q3U435 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Mmp25Q3U435 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Mmp25Q3U435 Gm13186-201ENSMUST00000118031 316 ntBASIC15.86■□□□□ 0.13
Mmp25Q3U435 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Mmp25Q3U435 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Mmp25Q3U435 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Mmp25Q3U435 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms