Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.65■□□□□ 0.26
Q3KNL4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Q3KNL4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Gm12441-201ENSMUST00000121806 588 ntBASIC16.65■□□□□ 0.26
Q3KNL4 Gm4974-201ENSMUST00000209974 875 ntBASIC16.65■□□□□ 0.26
Q3KNL4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.65■□□□□ 0.26
Q3KNL4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Q3KNL4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Q3KNL4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Q3KNL4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Q3KNL4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.64■□□□□ 0.25
Q3KNL4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Q3KNL4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Q3KNL4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Q3KNL4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.63■□□□□ 0.25
Q3KNL4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.63■□□□□ 0.25
Q3KNL4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Q3KNL4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.63■□□□□ 0.25
Q3KNL4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Q3KNL4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
Q3KNL4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.63■□□□□ 0.25
Q3KNL4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.63■□□□□ 0.25
Q3KNL4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Q3KNL4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.62■□□□□ 0.25
Q3KNL4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Q3KNL4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.62■□□□□ 0.25
Q3KNL4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Q3KNL4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Q3KNL4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Q3KNL4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.62■□□□□ 0.25
Q3KNL4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Q3KNL4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.61■□□□□ 0.25
Q3KNL4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Q3KNL4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Gm37292-201ENSMUST00000192062 758 ntBASIC16.61■□□□□ 0.25
Q3KNL4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.61■□□□□ 0.25
Q3KNL4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Q3KNL4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Q3KNL4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms