Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox4Q06831 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox4Q06831 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.62■□□□□ 0.25
Sox4Q06831 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Sox4Q06831 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox4Q06831 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
Sox4Q06831 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sox4Q06831 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Sox4Q06831 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox4Q06831 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox4Q06831 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.61■□□□□ 0.25
Sox4Q06831 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sox4Q06831 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Gm7977-201ENSMUST00000193787 748 ntBASIC16.61■□□□□ 0.25
Sox4Q06831 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sox4Q06831 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sox4Q06831 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Sox4Q06831 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox4Q06831 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox4Q06831 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Sox4Q06831 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox4Q06831 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sox4Q06831 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox4Q06831 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Sox4Q06831 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.6■□□□□ 0.25
Sox4Q06831 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.6■□□□□ 0.25
Sox4Q06831 Gm21559-201ENSMUST00000220638 855 ntBASIC16.6■□□□□ 0.25
Sox4Q06831 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sox4Q06831 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox4Q06831 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox4Q06831 Gm8587-201ENSMUST00000076538 843 ntBASIC16.6■□□□□ 0.25
Sox4Q06831 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Sox4Q06831 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox4Q06831 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Sox4Q06831 Actl10-202ENSMUST00000226583 1501 ntBASIC16.6■□□□□ 0.25
Sox4Q06831 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sox4Q06831 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox4Q06831 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sox4Q06831 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox4Q06831 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sox4Q06831 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox4Q06831 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sox4Q06831 Gm27389-201ENSMUST00000183622 195 ntBASIC16.59■□□□□ 0.25
Sox4Q06831 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox4Q06831 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox4Q06831 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox4Q06831 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox4Q06831 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.59■□□□□ 0.25
Sox4Q06831 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox4Q06831 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Sox4Q06831 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox4Q06831 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.59■□□□□ 0.25
Sox4Q06831 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Sox4Q06831 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox4Q06831 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sox4Q06831 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox4Q06831 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.58■□□□□ 0.24
Sox4Q06831 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.58■□□□□ 0.24
Sox4Q06831 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.58■□□□□ 0.24
Sox4Q06831 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox4Q06831 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox4Q06831 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox4Q06831 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.58■□□□□ 0.24
Sox4Q06831 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.58■□□□□ 0.24
Sox4Q06831 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox4Q06831 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox4Q06831 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox4Q06831 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox4Q06831 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sox4Q06831 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.57■□□□□ 0.24
Sox4Q06831 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 Gm26039-201ENSMUST00000158152 144 ntBASIC16.57■□□□□ 0.24
Sox4Q06831 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox4Q06831 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Sox4Q06831 Gm6659-201ENSMUST00000174752 547 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms