Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.39■□□□□ 0.53
Trim43cP86449 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.39■□□□□ 0.53
Trim43cP86449 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trim43cP86449 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43cP86449 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43cP86449 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43cP86449 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43cP86449 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43cP86449 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43cP86449 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim43cP86449 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43cP86449 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trim43cP86449 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43cP86449 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43cP86449 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim43cP86449 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Trim43cP86449 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim43cP86449 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim43cP86449 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.37■□□□□ 0.53
Trim43cP86449 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Trim43cP86449 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Mir6982-201ENSMUST00000184354 68 ntBASIC18.37■□□□□ 0.53
Trim43cP86449 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.37■□□□□ 0.53
Trim43cP86449 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trim43cP86449 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.37■□□□□ 0.53
Trim43cP86449 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim43cP86449 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Trim43cP86449 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim43cP86449 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trim43cP86449 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.36■□□□□ 0.53
Trim43cP86449 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim43cP86449 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Trim43cP86449 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim43cP86449 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trim43cP86449 Gm7889-201ENSMUST00000185591 958 ntBASIC18.36■□□□□ 0.53
Trim43cP86449 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.36■□□□□ 0.53
Trim43cP86449 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.36■□□□□ 0.53
Trim43cP86449 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.36■□□□□ 0.53
Trim43cP86449 Actl10-202ENSMUST00000226583 1501 ntBASIC18.36■□□□□ 0.53
Trim43cP86449 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trim43cP86449 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim43cP86449 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.36■□□□□ 0.53
Trim43cP86449 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim43cP86449 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.35■□□□□ 0.53
Trim43cP86449 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Gm13186-201ENSMUST00000118031 316 ntBASIC18.35■□□□□ 0.53
Trim43cP86449 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.35■□□□□ 0.53
Trim43cP86449 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trim43cP86449 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Gm10566-201ENSMUST00000086739 996 ntBASIC18.35■□□□□ 0.53
Trim43cP86449 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Trim43cP86449 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim43cP86449 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43cP86449 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43cP86449 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43cP86449 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43cP86449 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43cP86449 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43cP86449 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim43cP86449 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim43cP86449 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms