Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SgcbP82349 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.09■□□□□ 0.01
SgcbP82349 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SgcbP82349 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SgcbP82349 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.09■□□□□ 0.01
SgcbP82349 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.09■□□□□ 0.01
SgcbP82349 Gm10231-201ENSMUST00000181584 441 ntBASIC15.09■□□□□ 0.01
SgcbP82349 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Gm10175-202ENSMUST00000208752 441 ntBASIC15.09■□□□□ 0.01
SgcbP82349 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.09■□□□□ 0.01
SgcbP82349 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SgcbP82349 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SgcbP82349 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.08■□□□□ 0.01
SgcbP82349 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.08■□□□□ 0
SgcbP82349 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SgcbP82349 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.08■□□□□ 0
SgcbP82349 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.08■□□□□ 0
SgcbP82349 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.08■□□□□ 0
SgcbP82349 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SgcbP82349 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SgcbP82349 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
SgcbP82349 Rarb-207ENSMUST00000225921 2756 ntBASIC15.07■□□□□ 0
SgcbP82349 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.07■□□□□ 0
SgcbP82349 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.07■□□□□ 0
SgcbP82349 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SgcbP82349 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.07■□□□□ 0
SgcbP82349 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SgcbP82349 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SgcbP82349 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.07■□□□□ 0
SgcbP82349 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.06■□□□□ 0
SgcbP82349 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SgcbP82349 Gm18101-201ENSMUST00000215769 548 ntBASIC15.06■□□□□ 0
SgcbP82349 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.06■□□□□ 0
SgcbP82349 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.06■□□□□ 0
SgcbP82349 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
SgcbP82349 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SgcbP82349 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SgcbP82349 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SgcbP82349 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SgcbP82349 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
SgcbP82349 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
SgcbP82349 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SgcbP82349 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SgcbP82349 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SgcbP82349 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SgcbP82349 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.05■□□□□ -0
SgcbP82349 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms