Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Shox2P70390 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shox2P70390 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Shox2P70390 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Shox2P70390 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shox2P70390 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Shox2P70390 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.79■□□□□ 0.28
Shox2P70390 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Shox2P70390 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Shox2P70390 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.78■□□□□ 0.28
Shox2P70390 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Shox2P70390 Gm9988-201ENSMUST00000069786 435 ntBASIC16.78■□□□□ 0.28
Shox2P70390 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Shox2P70390 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Shox2P70390 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shox2P70390 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shox2P70390 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shox2P70390 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shox2P70390 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.77■□□□□ 0.28
Shox2P70390 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shox2P70390 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shox2P70390 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Shox2P70390 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shox2P70390 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Shox2P70390 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Shox2P70390 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Shox2P70390 Prob1-201ENSMUST00000097619 3021 ntBASIC16.77■□□□□ 0.27
Shox2P70390 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Shox2P70390 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Shox2P70390 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Shox2P70390 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Shox2P70390 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.76■□□□□ 0.27
Shox2P70390 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shox2P70390 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Shox2P70390 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Shox2P70390 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Gm6139-201ENSMUST00000079261 882 ntBASIC16.75■□□□□ 0.27
Shox2P70390 Zfp783-201ENSMUST00000095946 670 ntBASIC16.75■□□□□ 0.27
Shox2P70390 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shox2P70390 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.74■□□□□ 0.27
Shox2P70390 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Shox2P70390 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shox2P70390 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shox2P70390 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shox2P70390 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
Shox2P70390 Nespas-201ENSMUST00000143738 1083 ntBASIC16.74■□□□□ 0.27
Shox2P70390 Gm6420-201ENSMUST00000193885 723 ntBASIC16.74■□□□□ 0.27
Shox2P70390 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shox2P70390 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Shox2P70390 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shox2P70390 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shox2P70390 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Shox2P70390 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shox2P70390 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Shox2P70390 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms