Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ThraP63058 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ThraP63058 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.11■□□□□ 0.33
ThraP63058 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ThraP63058 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ThraP63058 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ThraP63058 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.11■□□□□ 0.33
ThraP63058 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ThraP63058 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.1■□□□□ 0.33
ThraP63058 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.1■□□□□ 0.33
ThraP63058 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ThraP63058 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.1■□□□□ 0.33
ThraP63058 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.1■□□□□ 0.33
ThraP63058 Gm10517-202ENSMUST00000192970 758 ntBASIC17.1■□□□□ 0.33
ThraP63058 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ThraP63058 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ThraP63058 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ThraP63058 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ThraP63058 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.09■□□□□ 0.33
ThraP63058 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ThraP63058 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ThraP63058 Gm12085-201ENSMUST00000119263 940 ntBASIC17.09■□□□□ 0.33
ThraP63058 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.09■□□□□ 0.33
ThraP63058 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ThraP63058 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.09■□□□□ 0.33
ThraP63058 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.09■□□□□ 0.33
ThraP63058 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ThraP63058 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ThraP63058 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ThraP63058 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ThraP63058 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ThraP63058 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ThraP63058 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
ThraP63058 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ThraP63058 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ThraP63058 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ThraP63058 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.08■□□□□ 0.32
ThraP63058 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ThraP63058 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ThraP63058 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ThraP63058 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ThraP63058 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ThraP63058 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ThraP63058 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ThraP63058 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.08■□□□□ 0.32
ThraP63058 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ThraP63058 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ThraP63058 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.07■□□□□ 0.32
ThraP63058 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Gm6659-201ENSMUST00000174752 547 ntBASIC17.07■□□□□ 0.32
ThraP63058 Gm27463-201ENSMUST00000183569 57 ntBASIC17.07■□□□□ 0.32
ThraP63058 Gm18959-201ENSMUST00000208954 655 ntBASIC17.07■□□□□ 0.32
ThraP63058 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.07■□□□□ 0.32
ThraP63058 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.07■□□□□ 0.32
ThraP63058 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ThraP63058 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms