Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.1□□□□□ -0.47
Cks1bP61025 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.1□□□□□ -0.47
Cks1bP61025 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.1□□□□□ -0.47
Cks1bP61025 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.1□□□□□ -0.47
Cks1bP61025 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cks1bP61025 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cks1bP61025 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cks1bP61025 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.1□□□□□ -0.47
Cks1bP61025 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.09□□□□□ -0.47
Cks1bP61025 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Cks1bP61025 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Gm43060-201ENSMUST00000200621 289 ntBASIC12.09□□□□□ -0.47
Cks1bP61025 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cks1bP61025 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cks1bP61025 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cks1bP61025 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.09□□□□□ -0.47
Cks1bP61025 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Tgds-204ENSMUST00000228543 1594 ntBASIC12.09□□□□□ -0.47
Cks1bP61025 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cks1bP61025 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.08□□□□□ -0.48
Cks1bP61025 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
Cks1bP61025 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cks1bP61025 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.08□□□□□ -0.48
Cks1bP61025 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.08□□□□□ -0.48
Cks1bP61025 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.08□□□□□ -0.48
Cks1bP61025 Gm21956-201ENSMUST00000179946 522 ntBASIC12.08□□□□□ -0.48
Cks1bP61025 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.08□□□□□ -0.48
Cks1bP61025 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Gm9988-201ENSMUST00000069786 435 ntBASIC12.08□□□□□ -0.48
Cks1bP61025 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.08□□□□□ -0.48
Cks1bP61025 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cks1bP61025 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cks1bP61025 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cks1bP61025 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.07□□□□□ -0.48
Cks1bP61025 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cks1bP61025 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.07□□□□□ -0.48
Cks1bP61025 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.07□□□□□ -0.48
Cks1bP61025 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cks1bP61025 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cks1bP61025 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cks1bP61025 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms