Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.91■□□□□ 0.62
Tpm1P58771 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.91■□□□□ 0.62
Tpm1P58771 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tpm1P58771 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.91■□□□□ 0.62
Tpm1P58771 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Tpm1P58771 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.9■□□□□ 0.62
Tpm1P58771 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.9■□□□□ 0.62
Tpm1P58771 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Tpm1P58771 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.9■□□□□ 0.62
Tpm1P58771 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tpm1P58771 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.9■□□□□ 0.62
Tpm1P58771 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tpm1P58771 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Tpm1P58771 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Tpm1P58771 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Tpm1P58771 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm1P58771 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm1P58771 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm1P58771 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Tpm1P58771 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm1P58771 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm1P58771 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Tpm1P58771 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm1P58771 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.89■□□□□ 0.61
Tpm1P58771 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm1P58771 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm1P58771 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Tpm1P58771 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tpm1P58771 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Gm13401-201ENSMUST00000117074 291 ntBASIC18.88■□□□□ 0.61
Tpm1P58771 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.88■□□□□ 0.61
Tpm1P58771 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.88■□□□□ 0.61
Tpm1P58771 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tpm1P58771 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Tpm1P58771 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.88■□□□□ 0.61
Tpm1P58771 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tpm1P58771 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Tpm1P58771 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tpm1P58771 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tpm1P58771 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm1P58771 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm1P58771 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.87■□□□□ 0.61
Tpm1P58771 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm1P58771 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Tpm1P58771 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Tpm1P58771 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Tpm1P58771 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm1P58771 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm1P58771 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm1P58771 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm1P58771 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tpm1P58771 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Tpm1P58771 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm1P58771 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm1P58771 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm1P58771 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tpm1P58771 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.86■□□□□ 0.61
Tpm1P58771 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tpm1P58771 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Tpm1P58771 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Tpm1P58771 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Tpm1P58771 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Tpm1P58771 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tpm1P58771 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.85■□□□□ 0.61
Tpm1P58771 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms