Protein–RNA interactions for Protein: P58242

Smpdl3b, Acid sphingomyelinase-like phosphodiesterase 3b, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpdl3bP58242 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Smpdl3bP58242 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smpdl3bP58242 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.14■□□□□ 0.33
Smpdl3bP58242 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smpdl3bP58242 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smpdl3bP58242 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smpdl3bP58242 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smpdl3bP58242 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smpdl3bP58242 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smpdl3bP58242 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.13■□□□□ 0.33
Smpdl3bP58242 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smpdl3bP58242 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smpdl3bP58242 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Smpdl3bP58242 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.12■□□□□ 0.33
Smpdl3bP58242 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.12■□□□□ 0.33
Smpdl3bP58242 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.12■□□□□ 0.33
Smpdl3bP58242 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smpdl3bP58242 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smpdl3bP58242 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smpdl3bP58242 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smpdl3bP58242 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.11■□□□□ 0.33
Smpdl3bP58242 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smpdl3bP58242 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smpdl3bP58242 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smpdl3bP58242 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smpdl3bP58242 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smpdl3bP58242 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smpdl3bP58242 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Gm22697-201ENSMUST00000175194 63 ntBASIC17.09■□□□□ 0.33
Smpdl3bP58242 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Gm18101-201ENSMUST00000215769 548 ntBASIC17.09■□□□□ 0.33
Smpdl3bP58242 Gm18032-201ENSMUST00000222541 538 ntBASIC17.09■□□□□ 0.33
Smpdl3bP58242 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Smpdl3bP58242 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smpdl3bP58242 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Smpdl3bP58242 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Smpdl3bP58242 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.08■□□□□ 0.33
Smpdl3bP58242 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smpdl3bP58242 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Smpdl3bP58242 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smpdl3bP58242 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smpdl3bP58242 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smpdl3bP58242 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smpdl3bP58242 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smpdl3bP58242 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smpdl3bP58242 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms