Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Xcl1P47993 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC11.09□□□□□ -0.63
Xcl1P47993 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Xcl1P47993 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Xcl1P47993 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Xcl1P47993 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Xcl1P47993 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.09□□□□□ -0.63
Xcl1P47993 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Xcl1P47993 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC11.08□□□□□ -0.64
Xcl1P47993 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.08□□□□□ -0.64
Xcl1P47993 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Xcl1P47993 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
Xcl1P47993 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Xcl1P47993 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Xcl1P47993 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.07□□□□□ -0.64
Xcl1P47993 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.07□□□□□ -0.64
Xcl1P47993 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC11.07□□□□□ -0.64
Xcl1P47993 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Xcl1P47993 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Xcl1P47993 Gm10657-201ENSMUST00000193528 1031 ntBASIC11.07□□□□□ -0.64
Xcl1P47993 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC11.07□□□□□ -0.64
Xcl1P47993 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Xcl1P47993 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.07□□□□□ -0.64
Xcl1P47993 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Xcl1P47993 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Xcl1P47993 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Xcl1P47993 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Xcl1P47993 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Xcl1P47993 Sybu-209ENSMUST00000228639 4113 ntBASIC11.06□□□□□ -0.64
Xcl1P47993 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms