Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.16■□□□□ 0.18
Sox18P43680 Gm12644-201ENSMUST00000119935 606 ntBASIC16.16■□□□□ 0.18
Sox18P43680 Mir5131-201ENSMUST00000175426 93 ntBASIC16.16■□□□□ 0.18
Sox18P43680 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.16■□□□□ 0.18
Sox18P43680 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.16■□□□□ 0.18
Sox18P43680 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sox18P43680 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Sox18P43680 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sox18P43680 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox18P43680 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.15■□□□□ 0.18
Sox18P43680 AC073947.1-201ENSMUST00000216991 649 ntBASIC16.15■□□□□ 0.18
Sox18P43680 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.15■□□□□ 0.18
Sox18P43680 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sox18P43680 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox18P43680 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.15■□□□□ 0.18
Sox18P43680 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sox18P43680 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Sox18P43680 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Gm7862-201ENSMUST00000121461 292 ntBASIC16.14■□□□□ 0.17
Sox18P43680 Gm6736-201ENSMUST00000166583 948 ntBASIC16.14■□□□□ 0.17
Sox18P43680 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.14■□□□□ 0.17
Sox18P43680 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox18P43680 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.14■□□□□ 0.17
Sox18P43680 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Grk6-206ENSMUST00000224995 2971 ntBASIC16.14■□□□□ 0.17
Sox18P43680 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox18P43680 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.13■□□□□ 0.17
Sox18P43680 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox18P43680 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox18P43680 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox18P43680 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox18P43680 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox18P43680 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox18P43680 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sox18P43680 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Sox18P43680 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.13■□□□□ 0.17
Sox18P43680 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sox18P43680 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.13■□□□□ 0.17
Sox18P43680 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Sox18P43680 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox18P43680 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox18P43680 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Sox18P43680 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sox18P43680 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.13■□□□□ 0.17
Sox18P43680 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox18P43680 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sox18P43680 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.12■□□□□ 0.17
Sox18P43680 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sox18P43680 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.12■□□□□ 0.17
Sox18P43680 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.12■□□□□ 0.17
Sox18P43680 Gm18558-201ENSMUST00000186253 1214 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms