Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Gm27357-201ENSMUST00000183754 135 ntBASIC14.01□□□□□ -0.17
Abca1P41233 Gm27459-201ENSMUST00000184860 107 ntBASIC14.01□□□□□ -0.17
Abca1P41233 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14□□□□□ -0.17
Abca1P41233 Gm24841-201ENSMUST00000158676 357 ntBASIC14□□□□□ -0.17
Abca1P41233 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 AC120002.2-201ENSMUST00000220205 773 ntBASIC14□□□□□ -0.17
Abca1P41233 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 Birc2-201ENSMUST00000054878 378 ntBASIC14□□□□□ -0.17
Abca1P41233 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Abca1P41233 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Abca1P41233 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Abca1P41233 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Abca1P41233 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Abca1P41233 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Abca1P41233 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.99□□□□□ -0.17
Abca1P41233 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.99□□□□□ -0.17
Abca1P41233 Gm25925-201ENSMUST00000158314 306 ntBASIC13.99□□□□□ -0.17
Abca1P41233 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Abca1P41233 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Abca1P41233 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Abca1P41233 Gm9731-201ENSMUST00000209480 747 ntBASIC13.99□□□□□ -0.17
Abca1P41233 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.99□□□□□ -0.17
Abca1P41233 Il3ra-202ENSMUST00000223589 738 ntBASIC13.99□□□□□ -0.17
Abca1P41233 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Abca1P41233 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Abca1P41233 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Abca1P41233 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.98□□□□□ -0.17
Abca1P41233 Gm24589-201ENSMUST00000116692 94 ntBASIC13.98□□□□□ -0.17
Abca1P41233 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Gm26039-201ENSMUST00000158152 144 ntBASIC13.98□□□□□ -0.17
Abca1P41233 Gm6443-201ENSMUST00000203599 874 ntBASIC13.98□□□□□ -0.17
Abca1P41233 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Abca1P41233 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.98□□□□□ -0.17
Abca1P41233 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.98□□□□□ -0.17
Abca1P41233 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Abca1P41233 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.98□□□□□ -0.17
Abca1P41233 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Abca1P41233 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Abca1P41233 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Abca1P41233 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.98□□□□□ -0.17
Abca1P41233 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.97□□□□□ -0.17
Abca1P41233 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.97□□□□□ -0.17
Abca1P41233 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.97□□□□□ -0.17
Abca1P41233 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Abca1P41233 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Abca1P41233 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Abca1P41233 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms