Protein–RNA interactions for Protein: P40694

Ighmbp2, DNA-binding protein SMUBP-2, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighmbp2P40694 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighmbp2P40694 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighmbp2P40694 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighmbp2P40694 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighmbp2P40694 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Gm13401-201ENSMUST00000117074 291 ntBASIC18.1■□□□□ 0.49
Ighmbp2P40694 Gm13216-201ENSMUST00000117145 591 ntBASIC18.1■□□□□ 0.49
Ighmbp2P40694 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.1■□□□□ 0.49
Ighmbp2P40694 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ighmbp2P40694 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.09■□□□□ 0.49
Ighmbp2P40694 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Gm11249-201ENSMUST00000117071 859 ntBASIC18.09■□□□□ 0.49
Ighmbp2P40694 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Gm10698-201ENSMUST00000182663 604 ntBASIC18.09■□□□□ 0.49
Ighmbp2P40694 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Zfp783-201ENSMUST00000095946 670 ntBASIC18.09■□□□□ 0.49
Ighmbp2P40694 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighmbp2P40694 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Ighmbp2P40694 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Ighmbp2P40694 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighmbp2P40694 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighmbp2P40694 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighmbp2P40694 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Ighmbp2P40694 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighmbp2P40694 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Gm15565-201ENSMUST00000118890 427 ntBASIC18.08■□□□□ 0.48
Ighmbp2P40694 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighmbp2P40694 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Gm18666-201ENSMUST00000190039 958 ntBASIC18.07■□□□□ 0.48
Ighmbp2P40694 Gm44549-201ENSMUST00000208351 577 ntBASIC18.07■□□□□ 0.48
Ighmbp2P40694 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.07■□□□□ 0.48
Ighmbp2P40694 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Ighmbp2P40694 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.06■□□□□ 0.48
Ighmbp2P40694 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ighmbp2P40694 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighmbp2P40694 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ighmbp2P40694 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighmbp2P40694 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.06■□□□□ 0.48
Ighmbp2P40694 Gm10418-201ENSMUST00000100943 576 ntBASIC18.06■□□□□ 0.48
Ighmbp2P40694 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighmbp2P40694 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms