Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.85□□□□□ -0.19
Timp3P39876 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Timp3P39876 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Timp3P39876 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.85□□□□□ -0.19
Timp3P39876 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Timp3P39876 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Haglr-201ENSMUST00000100000 2085 ntBASIC13.84□□□□□ -0.19
Timp3P39876 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.84□□□□□ -0.19
Timp3P39876 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Timp3P39876 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.84□□□□□ -0.19
Timp3P39876 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Timp3P39876 Gm18101-201ENSMUST00000215769 548 ntBASIC13.84□□□□□ -0.19
Timp3P39876 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Timp3P39876 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Timp3P39876 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Timp3P39876 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.84□□□□□ -0.19
Timp3P39876 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Timp3P39876 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Timp3P39876 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Timp3P39876 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Timp3P39876 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Timp3P39876 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.83□□□□□ -0.2
Timp3P39876 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.83□□□□□ -0.2
Timp3P39876 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Timp3P39876 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Timp3P39876 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Timp3P39876 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Timp3P39876 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Timp3P39876 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Timp3P39876 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.82□□□□□ -0.2
Timp3P39876 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.82□□□□□ -0.2
Timp3P39876 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Timp3P39876 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Timp3P39876 Gm9731-201ENSMUST00000209480 747 ntBASIC13.82□□□□□ -0.2
Timp3P39876 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.82□□□□□ -0.2
Timp3P39876 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Timp3P39876 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Timp3P39876 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Timp3P39876 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Timp3P39876 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Timp3P39876 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Timp3P39876 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Timp3P39876 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Timp3P39876 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Timp3P39876 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Timp3P39876 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Timp3P39876 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Timp3P39876 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Timp3P39876 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Timp3P39876 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Timp3P39876 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Timp3P39876 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms