Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.83□□□□□ -0.04
Upk2P38575 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.83□□□□□ -0.04
Upk2P38575 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk2P38575 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk2P38575 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Upk2P38575 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk2P38575 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.83□□□□□ -0.04
Upk2P38575 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk2P38575 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.83□□□□□ -0.04
Upk2P38575 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk2P38575 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk2P38575 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Upk2P38575 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Upk2P38575 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.82□□□□□ -0.04
Upk2P38575 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.82□□□□□ -0.04
Upk2P38575 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.82□□□□□ -0.04
Upk2P38575 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.82□□□□□ -0.04
Upk2P38575 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.82□□□□□ -0.04
Upk2P38575 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.82□□□□□ -0.04
Upk2P38575 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Upk2P38575 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.81□□□□□ -0.04
Upk2P38575 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Upk2P38575 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Upk2P38575 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Upk2P38575 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.81□□□□□ -0.04
Upk2P38575 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.81□□□□□ -0.04
Upk2P38575 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.81□□□□□ -0.04
Upk2P38575 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.81□□□□□ -0.04
Upk2P38575 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Upk2P38575 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.81□□□□□ -0.04
Upk2P38575 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Upk2P38575 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Upk2P38575 Haglr-201ENSMUST00000100000 2085 ntBASIC14.8□□□□□ -0.04
Upk2P38575 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Upk2P38575 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk2P38575 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Upk2P38575 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Upk2P38575 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.8□□□□□ -0.04
Upk2P38575 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Upk2P38575 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Upk2P38575 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upk2P38575 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.79□□□□□ -0.04
Upk2P38575 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.79□□□□□ -0.04
Upk2P38575 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Upk2P38575 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Upk2P38575 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Upk2P38575 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms