Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.01■□□□□ 0.31
RxrbP28704 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RxrbP28704 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
RxrbP28704 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RxrbP28704 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17■□□□□ 0.31
RxrbP28704 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17■□□□□ 0.31
RxrbP28704 Gm44616-201ENSMUST00000206417 1732 ntBASIC17■□□□□ 0.31
RxrbP28704 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RxrbP28704 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RxrbP28704 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RxrbP28704 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.99■□□□□ 0.31
RxrbP28704 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RxrbP28704 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
RxrbP28704 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RxrbP28704 Gm11643-201ENSMUST00000119578 864 ntBASIC16.99■□□□□ 0.31
RxrbP28704 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.99■□□□□ 0.31
RxrbP28704 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.99■□□□□ 0.31
RxrbP28704 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.99■□□□□ 0.31
RxrbP28704 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RxrbP28704 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.98■□□□□ 0.31
RxrbP28704 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Gm11927-201ENSMUST00000118472 759 ntBASIC16.98■□□□□ 0.31
RxrbP28704 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.98■□□□□ 0.31
RxrbP28704 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RxrbP28704 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RxrbP28704 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.97■□□□□ 0.31
RxrbP28704 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RxrbP28704 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RxrbP28704 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RxrbP28704 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.97■□□□□ 0.31
RxrbP28704 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RxrbP28704 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RxrbP28704 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RxrbP28704 Mir6349-201ENSMUST00000184059 97 ntBASIC16.97■□□□□ 0.31
RxrbP28704 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.97■□□□□ 0.31
RxrbP28704 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RxrbP28704 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RxrbP28704 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RxrbP28704 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RxrbP28704 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms