Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nckap1P28660 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nckap1P28660 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nckap1P28660 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nckap1P28660 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nckap1P28660 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nckap1P28660 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nckap1P28660 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.83■□□□□ 0.28
Nckap1P28660 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nckap1P28660 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nckap1P28660 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Nckap1P28660 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nckap1P28660 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nckap1P28660 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Nckap1P28660 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nckap1P28660 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nckap1P28660 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Nckap1P28660 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.82■□□□□ 0.28
Nckap1P28660 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.82■□□□□ 0.28
Nckap1P28660 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.82■□□□□ 0.28
Nckap1P28660 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.82■□□□□ 0.28
Nckap1P28660 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Nckap1P28660 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nckap1P28660 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.82■□□□□ 0.28
Nckap1P28660 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nckap1P28660 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.81■□□□□ 0.28
Nckap1P28660 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nckap1P28660 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nckap1P28660 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nckap1P28660 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.8■□□□□ 0.28
Nckap1P28660 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Nckap1P28660 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.8■□□□□ 0.28
Nckap1P28660 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Nckap1P28660 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Nckap1P28660 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Nckap1P28660 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Gm18669-201ENSMUST00000216049 778 ntBASIC16.8■□□□□ 0.28
Nckap1P28660 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nckap1P28660 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nckap1P28660 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.8■□□□□ 0.28
Nckap1P28660 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nckap1P28660 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nckap1P28660 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nckap1P28660 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nckap1P28660 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nckap1P28660 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nckap1P28660 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nckap1P28660 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nckap1P28660 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms