Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Irf8P23611 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Irf8P23611 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.23■□□□□ 0.51
Irf8P23611 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.23■□□□□ 0.51
Irf8P23611 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.23■□□□□ 0.51
Irf8P23611 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.23■□□□□ 0.51
Irf8P23611 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.23■□□□□ 0.51
Irf8P23611 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Irf8P23611 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.23■□□□□ 0.51
Irf8P23611 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.23■□□□□ 0.51
Irf8P23611 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Irf8P23611 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Irf8P23611 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Irf8P23611 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Irf8P23611 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Irf8P23611 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Irf8P23611 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Irf8P23611 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Irf8P23611 Gm18115-201ENSMUST00000221209 621 ntBASIC18.22■□□□□ 0.51
Irf8P23611 Gm18032-201ENSMUST00000222541 538 ntBASIC18.22■□□□□ 0.51
Irf8P23611 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.22■□□□□ 0.51
Irf8P23611 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Irf8P23611 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Irf8P23611 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Irf8P23611 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Irf8P23611 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Gm10231-201ENSMUST00000181584 441 ntBASIC18.21■□□□□ 0.51
Irf8P23611 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Gm10175-202ENSMUST00000208752 441 ntBASIC18.21■□□□□ 0.51
Irf8P23611 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Irf8P23611 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Irf8P23611 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Irf8P23611 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Irf8P23611 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Irf8P23611 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf8P23611 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Irf8P23611 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.21■□□□□ 0.5
Irf8P23611 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Irf8P23611 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Irf8P23611 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Irf8P23611 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.2■□□□□ 0.5
Irf8P23611 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.2■□□□□ 0.5
Irf8P23611 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.2■□□□□ 0.5
Irf8P23611 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Irf8P23611 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Irf8P23611 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.2■□□□□ 0.5
Irf8P23611 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Gm10566-201ENSMUST00000086739 996 ntBASIC18.2■□□□□ 0.5
Irf8P23611 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Irf8P23611 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.2■□□□□ 0.5
Irf8P23611 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf8P23611 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf8P23611 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.19■□□□□ 0.5
Irf8P23611 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Irf8P23611 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf8P23611 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf8P23611 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf8P23611 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms