Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmga1P17095 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmga1P17095 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmga1P17095 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmga1P17095 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmga1P17095 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmga1P17095 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmga1P17095 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmga1P17095 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmga1P17095 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmga1P17095 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Hmga1P17095 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hmga1P17095 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmga1P17095 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Hmga1P17095 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmga1P17095 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hmga1P17095 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.27■□□□□ 0.36
Hmga1P17095 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmga1P17095 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Hmga1P17095 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Hmga1P17095 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmga1P17095 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Hmga1P17095 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hmga1P17095 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmga1P17095 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmga1P17095 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmga1P17095 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hmga1P17095 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmga1P17095 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.26■□□□□ 0.35
Hmga1P17095 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.26■□□□□ 0.35
Hmga1P17095 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmga1P17095 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hmga1P17095 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.26■□□□□ 0.35
Hmga1P17095 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmga1P17095 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmga1P17095 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmga1P17095 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmga1P17095 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmga1P17095 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmga1P17095 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmga1P17095 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Hmga1P17095 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.25■□□□□ 0.35
Hmga1P17095 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Hmga1P17095 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmga1P17095 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmga1P17095 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmga1P17095 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmga1P17095 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmga1P17095 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hmga1P17095 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.25■□□□□ 0.35
Hmga1P17095 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmga1P17095 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Hmga1P17095 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmga1P17095 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Hmga1P17095 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmga1P17095 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.25■□□□□ 0.35
Hmga1P17095 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmga1P17095 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmga1P17095 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.24■□□□□ 0.35
Hmga1P17095 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Hmga1P17095 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.24■□□□□ 0.35
Hmga1P17095 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Hmga1P17095 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.24■□□□□ 0.35
Hmga1P17095 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmga1P17095 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga1P17095 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga1P17095 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga1P17095 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga1P17095 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga1P17095 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.23■□□□□ 0.35
Hmga1P17095 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Hmga1P17095 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga1P17095 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga1P17095 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga1P17095 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Hmga1P17095 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.22■□□□□ 0.35
Hmga1P17095 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga1P17095 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga1P17095 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga1P17095 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga1P17095 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.22■□□□□ 0.35
Hmga1P17095 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga1P17095 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga1P17095 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.22■□□□□ 0.35
Hmga1P17095 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga1P17095 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.22■□□□□ 0.35
Hmga1P17095 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.22■□□□□ 0.35
Hmga1P17095 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms