Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Gm6659-201ENSMUST00000174752 547 ntBASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Gm21559-201ENSMUST00000220638 855 ntBASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Gm8587-201ENSMUST00000076538 843 ntBASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ly6c1P0CW02 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ly6c1P0CW02 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Gm26039-201ENSMUST00000158152 144 ntBASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Gm27389-201ENSMUST00000183622 195 ntBASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Gm25007-201ENSMUST00000083808 133 ntBASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ly6c1P0CW02 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms