Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PtcraP0C6B2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.67□□□□□ -0.06
PtcraP0C6B2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.67□□□□□ -0.06
PtcraP0C6B2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
PtcraP0C6B2 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.67□□□□□ -0.06
PtcraP0C6B2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.67□□□□□ -0.06
PtcraP0C6B2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.67□□□□□ -0.06
PtcraP0C6B2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PtcraP0C6B2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.66□□□□□ -0.06
PtcraP0C6B2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Gm7370-201ENSMUST00000219471 767 ntBASIC14.66□□□□□ -0.06
PtcraP0C6B2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PtcraP0C6B2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.65□□□□□ -0.06
PtcraP0C6B2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
PtcraP0C6B2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
PtcraP0C6B2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.64□□□□□ -0.07
PtcraP0C6B2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PtcraP0C6B2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms