Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Gm5643-201ENSMUST00000117081 966 ntBASIC16.64■□□□□ 0.25
Apoa4P06728 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Apoa4P06728 Gm20760-201ENSMUST00000179197 648 ntBASIC16.64■□□□□ 0.25
Apoa4P06728 Gm4974-201ENSMUST00000209974 875 ntBASIC16.64■□□□□ 0.25
Apoa4P06728 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.64■□□□□ 0.25
Apoa4P06728 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Apoa4P06728 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Apoa4P06728 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Apoa4P06728 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Apoa4P06728 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Apoa4P06728 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Apoa4P06728 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Apoa4P06728 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Apoa4P06728 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Apoa4P06728 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.63■□□□□ 0.25
Apoa4P06728 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Apoa4P06728 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Apoa4P06728 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.63■□□□□ 0.25
Apoa4P06728 Gm15378-201ENSMUST00000121894 207 ntBASIC16.63■□□□□ 0.25
Apoa4P06728 Gm37292-201ENSMUST00000192062 758 ntBASIC16.63■□□□□ 0.25
Apoa4P06728 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Apoa4P06728 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Apoa4P06728 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Apoa4P06728 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.62■□□□□ 0.25
Apoa4P06728 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.62■□□□□ 0.25
Apoa4P06728 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Apoa4P06728 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.62■□□□□ 0.25
Apoa4P06728 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Apoa4P06728 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Apoa4P06728 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Apoa4P06728 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Apoa4P06728 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.61■□□□□ 0.25
Apoa4P06728 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Apoa4P06728 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Apoa4P06728 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Apoa4P06728 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.61■□□□□ 0.25
Apoa4P06728 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.6■□□□□ 0.25
Apoa4P06728 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.6■□□□□ 0.25
Apoa4P06728 Gm29257-201ENSMUST00000186115 639 ntBASIC16.6■□□□□ 0.25
Apoa4P06728 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Apoa4P06728 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Apoa4P06728 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Apoa4P06728 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.6■□□□□ 0.25
Apoa4P06728 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Apoa4P06728 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms