Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.05■□□□□ 0.16
Tgfbr3O88393 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tgfbr3O88393 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.04■□□□□ 0.16
Tgfbr3O88393 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Gm15372-201ENSMUST00000120729 834 ntBASIC16.04■□□□□ 0.16
Tgfbr3O88393 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.04■□□□□ 0.16
Tgfbr3O88393 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tgfbr3O88393 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Gm10052-201ENSMUST00000168019 960 ntBASIC16.03■□□□□ 0.16
Tgfbr3O88393 Gm44450-201ENSMUST00000199528 114 ntBASIC16.03■□□□□ 0.16
Tgfbr3O88393 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.03■□□□□ 0.16
Tgfbr3O88393 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.03■□□□□ 0.16
Tgfbr3O88393 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Gm7729-201ENSMUST00000050143 801 ntBASIC16.03■□□□□ 0.16
Tgfbr3O88393 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tgfbr3O88393 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.02■□□□□ 0.16
Tgfbr3O88393 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.02■□□□□ 0.16
Tgfbr3O88393 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tgfbr3O88393 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tgfbr3O88393 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tgfbr3O88393 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tgfbr3O88393 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tgfbr3O88393 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.01■□□□□ 0.15
Tgfbr3O88393 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tgfbr3O88393 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16■□□□□ 0.15
Tgfbr3O88393 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tgfbr3O88393 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Tgfbr3O88393 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16■□□□□ 0.15
Tgfbr3O88393 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16■□□□□ 0.15
Tgfbr3O88393 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16■□□□□ 0.15
Tgfbr3O88393 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16■□□□□ 0.15
Tgfbr3O88393 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tgfbr3O88393 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms