Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.72■□□□□ 0.59
IkbkbO88351 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IkbkbO88351 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IkbkbO88351 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.72■□□□□ 0.59
IkbkbO88351 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IkbkbO88351 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
IkbkbO88351 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IkbkbO88351 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
IkbkbO88351 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
IkbkbO88351 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.72■□□□□ 0.59
IkbkbO88351 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IkbkbO88351 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IkbkbO88351 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IkbkbO88351 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IkbkbO88351 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.71■□□□□ 0.59
IkbkbO88351 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IkbkbO88351 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.71■□□□□ 0.59
IkbkbO88351 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
IkbkbO88351 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IkbkbO88351 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IkbkbO88351 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IkbkbO88351 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IkbkbO88351 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IkbkbO88351 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
IkbkbO88351 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
IkbkbO88351 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.7■□□□□ 0.58
IkbkbO88351 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Gm7638-201ENSMUST00000121348 967 ntBASIC18.7■□□□□ 0.58
IkbkbO88351 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
IkbkbO88351 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.7■□□□□ 0.58
IkbkbO88351 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
IkbkbO88351 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.7■□□□□ 0.58
IkbkbO88351 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
IkbkbO88351 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
IkbkbO88351 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IkbkbO88351 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.7■□□□□ 0.58
IkbkbO88351 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
IkbkbO88351 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.69■□□□□ 0.58
IkbkbO88351 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IkbkbO88351 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.68■□□□□ 0.58
IkbkbO88351 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IkbkbO88351 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.68■□□□□ 0.58
IkbkbO88351 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IkbkbO88351 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IkbkbO88351 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
IkbkbO88351 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
IkbkbO88351 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
IkbkbO88351 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.68■□□□□ 0.58
IkbkbO88351 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
IkbkbO88351 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
IkbkbO88351 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.68■□□□□ 0.58
IkbkbO88351 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IkbkbO88351 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IkbkbO88351 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IkbkbO88351 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
IkbkbO88351 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IkbkbO88351 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.68■□□□□ 0.58
IkbkbO88351 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IkbkbO88351 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
IkbkbO88351 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IkbkbO88351 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.67■□□□□ 0.58
IkbkbO88351 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IkbkbO88351 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
IkbkbO88351 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IkbkbO88351 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.67■□□□□ 0.58
IkbkbO88351 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IkbkbO88351 Gm18959-201ENSMUST00000208954 655 ntBASIC18.67■□□□□ 0.58
IkbkbO88351 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IkbkbO88351 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IkbkbO88351 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IkbkbO88351 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IkbkbO88351 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IkbkbO88351 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
IkbkbO88351 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IkbkbO88351 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IkbkbO88351 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
IkbkbO88351 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms