Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top3aO70157 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top3aO70157 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Top3aO70157 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top3aO70157 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top3aO70157 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top3aO70157 Haglr-201ENSMUST00000100000 2085 ntBASIC17.02■□□□□ 0.32
Top3aO70157 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Top3aO70157 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.02■□□□□ 0.32
Top3aO70157 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Top3aO70157 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.02■□□□□ 0.32
Top3aO70157 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Top3aO70157 Gm10812-201ENSMUST00000099864 546 ntBASIC17.02■□□□□ 0.32
Top3aO70157 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Top3aO70157 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top3aO70157 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Top3aO70157 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top3aO70157 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Top3aO70157 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Top3aO70157 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.02■□□□□ 0.31
Top3aO70157 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Top3aO70157 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.01■□□□□ 0.31
Top3aO70157 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Top3aO70157 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.01■□□□□ 0.31
Top3aO70157 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Top3aO70157 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Top3aO70157 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Top3aO70157 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Top3aO70157 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Top3aO70157 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Top3aO70157 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Top3aO70157 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Top3aO70157 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top3aO70157 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top3aO70157 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Top3aO70157 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17■□□□□ 0.31
Top3aO70157 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Top3aO70157 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17■□□□□ 0.31
Top3aO70157 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17■□□□□ 0.31
Top3aO70157 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17■□□□□ 0.31
Top3aO70157 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17■□□□□ 0.31
Top3aO70157 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top3aO70157 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top3aO70157 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17■□□□□ 0.31
Top3aO70157 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Top3aO70157 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.99■□□□□ 0.31
Top3aO70157 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Gm12085-201ENSMUST00000119263 940 ntBASIC16.99■□□□□ 0.31
Top3aO70157 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.99■□□□□ 0.31
Top3aO70157 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Top3aO70157 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Top3aO70157 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Top3aO70157 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Top3aO70157 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Top3aO70157 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Top3aO70157 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Top3aO70157 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Top3aO70157 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Top3aO70157 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Top3aO70157 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Top3aO70157 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.98■□□□□ 0.31
Top3aO70157 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.98■□□□□ 0.31
Top3aO70157 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.98■□□□□ 0.31
Top3aO70157 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Top3aO70157 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Top3aO70157 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Top3aO70157 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Top3aO70157 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms