Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp8O70138 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp8O70138 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.63■□□□□ 0.89
Mmp8O70138 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp8O70138 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.62■□□□□ 0.89
Mmp8O70138 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.62■□□□□ 0.89
Mmp8O70138 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.62■□□□□ 0.89
Mmp8O70138 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.62■□□□□ 0.89
Mmp8O70138 Gm26039-201ENSMUST00000158152 144 ntBASIC20.62■□□□□ 0.89
Mmp8O70138 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Gm22697-201ENSMUST00000175194 63 ntBASIC20.62■□□□□ 0.89
Mmp8O70138 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.62■□□□□ 0.89
Mmp8O70138 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp8O70138 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mmp8O70138 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mmp8O70138 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.61■□□□□ 0.89
Mmp8O70138 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Gm13836-201ENSMUST00000121159 501 ntBASIC20.61■□□□□ 0.89
Mmp8O70138 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.61■□□□□ 0.89
Mmp8O70138 Gm21559-201ENSMUST00000220638 855 ntBASIC20.61■□□□□ 0.89
Mmp8O70138 Gm8587-201ENSMUST00000076538 843 ntBASIC20.61■□□□□ 0.89
Mmp8O70138 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp8O70138 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mmp8O70138 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.6■□□□□ 0.89
Mmp8O70138 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp8O70138 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.6■□□□□ 0.89
Mmp8O70138 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp8O70138 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp8O70138 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp8O70138 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp8O70138 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.6■□□□□ 0.89
Mmp8O70138 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp8O70138 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Mmp8O70138 Gm18101-201ENSMUST00000215769 548 ntBASIC20.6■□□□□ 0.89
Mmp8O70138 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp8O70138 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Mmp8O70138 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.59■□□□□ 0.89
Mmp8O70138 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Mmp8O70138 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20.59■□□□□ 0.89
Mmp8O70138 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Mmp8O70138 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.59■□□□□ 0.89
Mmp8O70138 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.59■□□□□ 0.89
Mmp8O70138 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp8O70138 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.58■□□□□ 0.89
Mmp8O70138 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp8O70138 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Mmp8O70138 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp8O70138 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp8O70138 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Mmp8O70138 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Mmp8O70138 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp8O70138 Gm13216-201ENSMUST00000117145 591 ntBASIC20.58■□□□□ 0.89
Mmp8O70138 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp8O70138 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.58■□□□□ 0.89
Mmp8O70138 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.58■□□□□ 0.89
Mmp8O70138 Gm44450-201ENSMUST00000199528 114 ntBASIC20.58■□□□□ 0.89
Mmp8O70138 Gm18115-201ENSMUST00000221209 621 ntBASIC20.58■□□□□ 0.89
Mmp8O70138 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.58■□□□□ 0.89
Mmp8O70138 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Mmp8O70138 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp8O70138 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp8O70138 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp8O70138 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp8O70138 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp8O70138 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp8O70138 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms