Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.82■□□□□ 0.28
Ldb2O55203 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb2O55203 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ldb2O55203 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb2O55203 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ldb2O55203 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb2O55203 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb2O55203 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ldb2O55203 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb2O55203 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb2O55203 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.81■□□□□ 0.28
Ldb2O55203 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Ldb2O55203 Gm7370-201ENSMUST00000219471 767 ntBASIC16.81■□□□□ 0.28
Ldb2O55203 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb2O55203 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb2O55203 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb2O55203 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ldb2O55203 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb2O55203 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb2O55203 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ldb2O55203 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.8■□□□□ 0.28
Ldb2O55203 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.8■□□□□ 0.28
Ldb2O55203 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.8■□□□□ 0.28
Ldb2O55203 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ldb2O55203 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Ldb2O55203 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.8■□□□□ 0.28
Ldb2O55203 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.8■□□□□ 0.28
Ldb2O55203 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.8■□□□□ 0.28
Ldb2O55203 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ldb2O55203 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ldb2O55203 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ldb2O55203 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ldb2O55203 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ldb2O55203 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ldb2O55203 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ldb2O55203 Gm15565-201ENSMUST00000118890 427 ntBASIC16.79■□□□□ 0.28
Ldb2O55203 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.79■□□□□ 0.28
Ldb2O55203 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ldb2O55203 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ldb2O55203 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ldb2O55203 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ldb2O55203 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ldb2O55203 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.79■□□□□ 0.28
Ldb2O55203 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ldb2O55203 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ldb2O55203 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Ldb2O55203 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ldb2O55203 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Ldb2O55203 Gm43799-201ENSMUST00000201845 579 ntBASIC16.78■□□□□ 0.28
Ldb2O55203 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.78■□□□□ 0.28
Ldb2O55203 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ldb2O55203 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ldb2O55203 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ldb2O55203 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ldb2O55203 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ldb2O55203 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.77■□□□□ 0.28
Ldb2O55203 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.77■□□□□ 0.28
Ldb2O55203 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ldb2O55203 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Gm2274-201ENSMUST00000184539 609 ntBASIC16.77■□□□□ 0.28
Ldb2O55203 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ldb2O55203 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ldb2O55203 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ldb2O55203 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ldb2O55203 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ldb2O55203 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms