Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.62■□□□□ 0.57
Prom1O54990 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Prom1O54990 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Prom1O54990 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Prom1O54990 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Prom1O54990 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.61■□□□□ 0.57
Prom1O54990 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Prom1O54990 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.6■□□□□ 0.57
Prom1O54990 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prom1O54990 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prom1O54990 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Prom1O54990 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prom1O54990 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Prom1O54990 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prom1O54990 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prom1O54990 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prom1O54990 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prom1O54990 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Prom1O54990 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.6■□□□□ 0.57
Prom1O54990 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Prom1O54990 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Prom1O54990 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.6■□□□□ 0.57
Prom1O54990 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Prom1O54990 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Prom1O54990 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Prom1O54990 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Prom1O54990 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.59■□□□□ 0.57
Prom1O54990 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Prom1O54990 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Prom1O54990 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prom1O54990 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Prom1O54990 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Prom1O54990 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prom1O54990 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Prom1O54990 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Prom1O54990 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.58■□□□□ 0.56
Prom1O54990 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.58■□□□□ 0.56
Prom1O54990 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.58■□□□□ 0.56
Prom1O54990 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prom1O54990 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prom1O54990 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Prom1O54990 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Prom1O54990 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Prom1O54990 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.58■□□□□ 0.56
Prom1O54990 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.57■□□□□ 0.56
Prom1O54990 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.57■□□□□ 0.56
Prom1O54990 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Prom1O54990 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.57■□□□□ 0.56
Prom1O54990 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Gm29707-201ENSMUST00000196325 491 ntBASIC18.57■□□□□ 0.56
Prom1O54990 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Prom1O54990 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.57■□□□□ 0.56
Prom1O54990 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.57■□□□□ 0.56
Prom1O54990 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prom1O54990 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prom1O54990 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prom1O54990 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.56■□□□□ 0.56
Prom1O54990 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prom1O54990 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.56■□□□□ 0.56
Prom1O54990 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prom1O54990 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms