Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Gm29518-201ENSMUST00000190858 372 ntBASIC17.57■□□□□ 0.4
Cldn5O54942 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Gm10819-201ENSMUST00000099988 561 ntBASIC17.57■□□□□ 0.4
Cldn5O54942 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn5O54942 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.56■□□□□ 0.4
Cldn5O54942 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.56■□□□□ 0.4
Cldn5O54942 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cldn5O54942 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cldn5O54942 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Cldn5O54942 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.56■□□□□ 0.4
Cldn5O54942 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.56■□□□□ 0.4
Cldn5O54942 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn5O54942 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cldn5O54942 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.55■□□□□ 0.4
Cldn5O54942 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.55■□□□□ 0.4
Cldn5O54942 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.55■□□□□ 0.4
Cldn5O54942 Gm17808-201ENSMUST00000200859 894 ntBASIC17.55■□□□□ 0.4
Cldn5O54942 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.55■□□□□ 0.4
Cldn5O54942 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cldn5O54942 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cldn5O54942 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cldn5O54942 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn5O54942 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cldn5O54942 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.54■□□□□ 0.4
Cldn5O54942 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Mir770-201ENSMUST00000103252 94 ntBASIC17.54■□□□□ 0.4
Cldn5O54942 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.54■□□□□ 0.4
Cldn5O54942 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cldn5O54942 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn5O54942 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cldn5O54942 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.53■□□□□ 0.4
Cldn5O54942 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Cldn5O54942 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.53■□□□□ 0.4
Cldn5O54942 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Cldn5O54942 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cldn5O54942 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn5O54942 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.53■□□□□ 0.4
Cldn5O54942 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.53■□□□□ 0.4
Cldn5O54942 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn5O54942 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn5O54942 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Cldn5O54942 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn5O54942 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms